Links
Vendors
Statistical Programs
Bioconductor
Freeware Microarray Statistical Software Site, and an open source and open development software project for the analysis and comprehension of genomic data.
http://www.bioconductor.org/
Freeware Microarray Statistical Software Site, and an open source and open development software project for the analysis and comprehension of genomic data.
http://www.bioconductor.org/
DAVID Bioinformatics Resources
The Database for Annotation, Visualization and Integrated Discovery (DAVID) 2008 is the sixth version of our original web-accessible programs. DAVID now provides a comprehensive set of functional annotation tools for investigators to understand biological
http://david.abcc.ncifcrf.gov/
The Database for Annotation, Visualization and Integrated Discovery (DAVID) 2008 is the sixth version of our original web-accessible programs. DAVID now provides a comprehensive set of functional annotation tools for investigators to understand biological
http://david.abcc.ncifcrf.gov/
MeV
Normalized and filtered expression files can be analyzed using TIGR Multiexperiment Viewer (MeV). MeV is a versatile microarray data analysis tool, incorporating sophisticated algorithms for clustering, visualization, classification, statistical analysis
http://www.tm4.org/mev.html
Normalized and filtered expression files can be analyzed using TIGR Multiexperiment Viewer (MeV). MeV is a versatile microarray data analysis tool, incorporating sophisticated algorithms for clustering, visualization, classification, statistical analysis
http://www.tm4.org/mev.html
RMAexpress
This program is a standalone GUI program for Windows (and Linux) to compute gene expression summary values for Affymetrix Genechip® data using the RMA and to carry out quality assessment using probe-level metrics.
http://rmaexpress.bmbolstad.com/
This program is a standalone GUI program for Windows (and Linux) to compute gene expression summary values for Affymetrix Genechip® data using the RMA and to carry out quality assessment using probe-level metrics.
http://rmaexpress.bmbolstad.com/
Onto-tools
Onto-Express -A novel tool able to automatically translate a list of differentially regulated genes into functional profiles characterizing the impact of the condition studied. other tools -Compare, Design, Translate, Miner & Pathway-Express.
http://vortex.cs.wayne.edu/projects.htm
Onto-Express -A novel tool able to automatically translate a list of differentially regulated genes into functional profiles characterizing the impact of the condition studied. other tools -Compare, Design, Translate, Miner & Pathway-Express.
http://vortex.cs.wayne.edu/projects.htm